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Table 1 Primer and probe sequences used for the negative strand HRV-16 RT-PCR reactions

From: Rhinovirus replication and innate immunity in highly differentiated human airway epithelial cells

Name

Purpose of oligonucleotide

Sequence

Neg-Tag-cDNA

Chimeric RT primer

5′- ATCAGCGATGCCGAACGTAT GGCAGCATGGGCAACCT-3′

Neg-HRV16-For

Real-time PCR Forward Primer

5′-TGCTGATGCAATACTCAAAAAGG-3’

Tag-Rev

Real-time PCR Reverse Primer

5′- ATCAGCGATGCCGAACGTAT -3’

Neg-Probe

Real-time PCR Probe

5’FAM-TGAAAAGCGAGGGA-MGB3’

  1. Underlined nucleotides denote non-viral tag sequences