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Table 2 Primers used in qRT-PCR amplification

From: Changes in transcriptome of native nasal epithelium expressing F508del-CFTR and intersecting data from comparable studies

Official gene symbol

Primer sequences (5to 3)

Primerbank ID

Product size

Efficiency

ACTB (Ref. Gene)

Fwd: CTCTTCCAGCCTTCCTTCCT

N/A

116 bp

100%

Rev: AGCACTGTGTTGGCGTACAG

ADM

Fwd: ATGAAGCTGGTTTCCGTCG

4501945a1

112 bp

100%

Rev: GCCCACTTATTCCACTTCTTTCG

AQP9

Fwd: CTGCAACCGTCTTTGGCATTT

10280624a3

118 bp

106%

Rev: AGATACGGAGCTGGGTATGTT

AREG

Fwd: GTGGTGCTGTCGCTCTTGATA

4502199a1

171 bp

97%

Rev: ACTCACAGGGGAAATCTCACT

GAPDH (Ref. Gene)

Fwd: CATGAGAAGTATGACAACAGCCT

7669492a3

113 bp

97%

Rev: AGTCCTTCCACGATACCAAAGT

GJA1 (Connexin 43)

Fwd: GTGCCTGAACTTGCCTTTTC

N/A

165 bp

98%

Rev: CCCTCCAGCAGTTGAGTAGG

IGFBP3

Fwd: AGAGCACAGATACCCAGAACT

4504617a2

105 bp

100%

Rev: TGAGGAACTTCAGGTGATTCAGT

NDRG1

Fwd: TCGAGACTTTACATGGCTCTGT

207028746b2

93 bp

106%

Rev: TCATGCCGATGTCATGGTAGG

SCGB1A1 (Uteroglobin)

Fwd: TTCAGCGTGTCATCGAAACCC

4507809a1

189 bp

100%

Rev: ACAGTGAGCTTTGGGCTATTTTT

SPAG6

Fwd: GTAAGGTGCTGCCGCATGATA

6912678a1

152 bp

100%

Rev: CCTCACTATTTCCTCGGGGTA

TEKT1

Fwd: CAGATTCGGATGAACCGCTCT

16753231a3

140 bp

103%

Rev: CTCACGGCGTTCTCAGAATATC

TMEM45a

Fwd: GTTCACTTCCTGTGTCCTTAACC

8922242b2

95 bp

97%

Rev: CATTTCCCGGCCATGAGTGT

  1. Forward and reverse primers for amplification of the indicated genes were found at Harvard Primerbank (primer IDs shown; N/A indicates in-house primer design). Product sizes and primer efficiencies for Pfaffl calculations are also shown.