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Table 2 KEGG pathway analysis of upregulated and downregulated DMGs determined using Web Gestalt

From: Genome-wide DNA methylation analysis in lung fibroblasts co-cultured with silica-exposed alveolar macrophages

Rank

Name

Ratio

Observation/total

p-Value

hypermethylated genes

1

Metabolic pathways

0.041

48/1169

2.22E-06

2

Pathways in cancer

0.053

17/319

0.0005

3

Regulation of actin cytoskeleton

0.072

15/208

6.96E-05

4

Focal adhesion

0.070

13/186

0.0004

5

Insulin signaling pathway

0.091

12/131

6.96E-05

hypomethylated genes

1

Metabolic pathways

0.091

107/1169

4.29E-22

2

Pathways in cancer

0.084

27/319

7.84E-05

3

MAPK signaling pathway

0.085

23/269

0.0002

4

Endocytosis

0.095

22/230

7.84E-05

5

Focal adhesion

0.112

21/186

1.46E-05