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Table 1 Representative genes that were increased more than 4-fold by IL-13 according to the global gene expression analysis (see Figure 4.)

From: Clarithromycin attenuates IL-13–induced periostin production in human lung fibroblasts

(A) Cluster

Gene Symbol

CAM effect

 Extracellular

PLXDC1

0.0342

 Extracellular

SLIT2

0.4594

 Extracellular

POSTN

0.4979

 Extracellular

WNT10B

0.4239

 Plasma membrane

CACNA1D

0.0807

 Plasma membrane

RTP1

0.1379

 Plasma membrane

SYT8

0.2078

 Plasma membrane

RALGPS1

0.2754

 Plasma membrane

APC

0.2138

 Defense response

CD40

0.0131

 Defense response

NOS2

0.3132

 Defense response

CD19

0.1667

 Defense response

IFNL1

0.0426

 Defense response

CXCL1

0.2197

(B) Cluster

Gene Symbol

CAM effect

 Glycoprotein

IL17RA

0.9564

 Glycoprotein

ST8SIA1

0.6773

 Glycoprotein

SPINT2

0.8788

 Glycoprotein

IL1RL1

0.7990

 Glycoprotein

SULF1

0.5449

 Glycoprotein

APLNR

1.0210

 Glycoprotein

HS3ST1

0.9854

 Chemotaxis

CCL26

1.2418

 Chemotaxis

IL6

0.8210

 Chemotaxis

PTGDR2

0.7217

 Signal regulator

SOCS1

1.1385

 Signal regulator

CISH

0.8930

(C) Cluster

Gene Symbol

IL-13 effect

 Chemotaxis

CCL26

35.6732

 Glycoprotein

HS3ST1

12.2410

 Glycoprotein

ST8SIA1

10.7933

 Chemotaxis

IL6

10.1221

 Signal regulator

CISH

8.9751

 Chemotaxis

PTGDR2

7.2666

 Unassigned

LINC00971

7.2156

 Signal regulator

SOCS1

6.3270

 Glycoprotein

IL17RA

5.9221

 Extracellular

SLIT2

5.7987

(D) Cluster

Gene Symbol

CAM effect

 Plasma membrane

SLC22A20

0.1237

 Unassigned

XLOC_006850

0.1403

 Unassigned

XLOC_014512

0.1420

 Unassigned

SPDYE8P

0.1491

 Defense response

CD19

0.1667

 Unassigned

LOC100129675

0.1696

 Unassigned

LOC102724783

0.1880

 Plasma membrane

SYT8

0.2078

 Centriole

SASS6

0.2079

 Plasma membrane

APC

0.2138

  1. (A) Genes suppressed by 50% or more by clarithromycin. (B) Genes not affected by clarithromycin. The clarithromycin (CAM) effect denotes the ratio of signal intensities obtained by clarithromycin treatment compared with no treatment. (C) The ten top-ranked ten genes induced by IL-13. (D) The ten top-ranked genes downregulated by clarithromycin in the presence of IL-13. The clarithromycin (CAM) effect denotes the ratio of signal intensities obtained by clarithromycin treatment compared with no treatment. The IL-13 effect denotes the ratio of signal intensities obtained by IL-13 stimulation compared with no stimulation