position in original publication | rs numbers | Alleles | Minor Allele Frequency | PCR Primer | Extension Primer | Callrate (%) | |
---|---|---|---|---|---|---|---|
 |  |  | Case Control | Cohort based |  |  |  |
F+1 | rs511898 | G/A | 0.38 | 0.36 | fwd ACGTTGGATGAAAATACTGGGACTCGAGGC rev ACGTTGGATGTGCTGTATCTATAGCCCTCC | ACTCGAGGCCTGTGAATTCC | 93.73 |
M+1 | rs3918395 | G/T | 0.15 | 0.13 | fwd ACGTTGGATGGGGCACCAATTAACTAAGGC rev ACGTTGGATGTGAGGGCATGGAAGGTTCAG | GCCGGCTCCCAAGCTCC | 92.03 |
S1 | rs3918396 | G/A | 0.09 | 0.09 | fwd ACGTTGGATGAGTCGGTAGCAACACCAGGC rev ACGTTGGATGAATCCCCGCAGACCATGACAC | CCTGCTGGCCATGCTCCTCAGC | 92.99 |
S2 | rs528557 | G/C | 0.28 | 0.28 | fwd ACGTTGGATGAGTCGGTAGCAACACCAGG rev ACGTTGGATGACCATGACACCTTCCTGCTG | GCTGCCTCTGCTCCCAGG | 91.88 |
ST+4 | rs44707 | A/C | 0.41 | 0.41 | fwd ACGTTGGATGGGAGTGAAAAGATGTGCTGG rev ACGTTGGATGCCACTTCCTCTGCACAAATC | ACAAATCACCTCTGTCACCC | 92.58 |
ST+5 | rs597980 | C/T | 0.44 | 0.45 | fwd ACGTTGGATGAGAGAACTGGGTTAAGGCAG rev ACGTTGGATGCCAGCACATCTTTTCACTCC | ACTCCATACCACTGGTCAGCTG | 93.81 |
ST+7 | rs574174 | G/A | 0.19 | 0.19 | fwd ACGTTGGATGCTGCCCTTGATGATTCCAAG rev ACGTTGGATGGGAACATCACAGGAAATGAC | ACTGTCCCCATCCCATC | 93.66 |
T1 | rs2280091 | T/C | 0.16 | 0.14 | fwd ACGTTGGATGTTCCCTTCTCCCTTCCCTCTC rev ACGTTGGATGTTGCTCAGCCCCAAAGATGG | GGGCGGCGTTCACCCCA | 93.77 |
T2 | rs2280090 | C/T | 0.16 | 0.14 | fwd ACGTTGGATGTTCCCTTCTCCCTTCCCTCTC rev ACGTTGGATGTTGCTCAGCCCCAAAGATGG | CCCCACAGCCACTGGACAG | 93.95 |
V4 | rs2787094 | C/G | 0.22 | 0.23 | fwd ACGTTGGATGAGAAACAGGAAGGAAGGTCC rev ACGTTGGATGTATGGTTCGACTGAGTCCAC | CTGAGTCCACACTCCCCTG | 93.84 |