Table 2 Identified clusters, annotated cell type, representative genes and their corresponding proportions
Cluster | Cell type | Representative genes | Proportion |
|---|---|---|---|
0 | CD4 + Tn | CCR7, LEF1 | 16.01% |
5 | CD4 + Trm | NR4A2, IL7R, PTGER4 | 7.79% |
8 | CD4 + Tm | S100A4, LTB | 6.17% |
1 | CD8 + Temra | PRF1, KLRG1, GZMH | 12.91% |
2 | CD8 + Tem | GZMK | 10.53% |
7 | CD8 + Tn | CCR7, LEF1 | 6.25% |
3 | Natural killer cell | GNLY, NKG7 | 8.04% |
11 | Natural killer cell | GNLY, NKG7 | 3.52% |
4 | B cell | IGKC | 7.94% |
9 | B cell | IGHD | 5.52% |
10 | B cell | MS4A1 | 3.73% |
6 | Classical Monocyte | CD14, S100A9, LYZ | 6.30% |
14 | Nonclassical Monocyte | CD16, FCGR3A, TCF7L2 | 0.64% |
15 | Monocyte | CD14, CLEC12A | 0.43% |
12 | Megakaryocyte | PPBP, PF4 | 2.64% |
13 | Myeloid dendritic cell | HLA-DRB1, HLA-DRB5 | 0.87% |
16 | Plasmacytoid dendritic cell | IRF7, IRF8 | 0.43% |
17 | STMN + T cell | CD3D, STMN | 0.28% |