Protein interaction networks provide insight into fetal origins of chronic obstructive pulmonary disease

Respiratory Research

Table 1 For each data set we show the number of genes which could be mapped to nominally differentially methylated CpG sites, or which are differentially expressed

Data set	# Genes, which could be mapped to nominally differentially methylated CpG sites	# Genes, which could be mapped to nominally differentially methylated CpG sites, found in the PPI	Size of the LCC given by genes, which could be mapped to nominally differentially methylated CpG sites
Fetal lung methylation	5175	4599	4297
COPD methylation	1217	1037	721
COPD expression	204	181	64

“Data set”: Which data set is considered.”# Genes, which could be mapped to nominally differentially methylated CpG sites”: How many genes could be mapped to nominally differentially methylated CpG sites or are significantly differentially expressed.”# Genes, which could be mapped to nominally differentially methylated CpG sites, found in the PPI”: How many of the significant genes of the set can be found in the protein protein interaction network HumanNet-FN.”Size of the LCC given by genes, which could be mapped to nominally differentially methylated CpG sites”: Size of the largest connected component in the HumanNet-FN given by the significant genes

ISSN: 1465-993X