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Table 1 Genetic association analysis was performed for beryllium-exposed individuals without disease (BeEx), beryllium sensitization (BeS), or diagnosed chronic beryllium disease (CBD) using a candidate gene approach

From: Analysis of single nucleotide polymorphisms in chronic beryllium disease

  

IL23

BTNL2

RAB23

ANXA11

OS9

  

rs11209026

A/G

rs28362677

C/T

rs28362678

A/G

rs2076530

A/G

rs772356421

G/A

rs11398

T/C

rs1040461

T/C

rs2573346

A/G

rs1049550

A/G

rs1050045

C/T

Amino acid change

R381/Q

M380I

P379L

S360G

G207S

R230C

-

Case

Control

          

BeS

BeEx

0.730

(0.331–1.278), p = 0.443

1.191

(0.776–1.780), p = 0.478

1.020

(0.663–1.629), p = 1.000

1.214

(0.889–1.670), p = 0.258

1.037

(0.690–1.608), p = 0.952

0.950

(0.619–1.413), p = 0.887

1.165

(0.649–1.948), p = 0.681

1.271

(0.941–1.719), p = 0.134

1.354

(1.002–1.829), p = 0.055*

1.126

(0.830–1.528), p = 0.490

CBD

BeEx

0.969

(0.495–1.704), p = 1.000

1.179

(0.765–1.767), p = 0.517

0.912

(0.600–1.431), p = 0.767

0.770

(0.566–1.048), p = 0.113

1.143

(0.757–1.790), p = 0.615

0.877

(0.567–1.310), p = 0.603

1.165

(0.649–1.948), p = 0.681

0.858

(0.627–1.166), p = 0.372

0.952

(0.696–1.293), p = 0.815

1.203

(0.883–1.640), p = 0.272

CBD

BeS

1.3456

(0.543–3.513), p = 0.675

0.987

(0.696–1.696), p = 1.000

0.899

(0.498–1.612), p = 0.834

0.648

(0.425–0.977), p = 0.044

1.103

(0.622–1.967), p = 0.850

0.922

(0.524–1.615), p = 0.886

1.000

(0.455–2.200), p = 1.000

0.712

(0.482–1.044), p = 0.075

0.736

(0.499–1.079), p = 0.112

1.072

(0.700–1.645), p = 0.836

CBD + 

BeS

BeEx

0.837

(0.5056–1.37), p = 0.561

1.184

(0.866–1.599), p = 0.325

0.964 (0.702-

1.343), p = 0.890

0.965

(0.769–1.212), p = 0.800

1.089

(0.802–1.500), p = 0.654

0.913

(0.668–1.229), p = 0.607

1.167

(0.764–1.730), p = 0.518

1.048

(0.838–1.308), p = 0.722

1.137

(0.910–1.42), p = 0.275

1.164

(0.928–1.461), p = 0.208

CBD

BeEx + BeS

0.991

(0.509–1.736), p = 1.000

1.157

(0.755–1.734), p = 0.564

0.912

(0.603–1.425), p = 0.760

0.759

(0.560–1.030), p = 0.089

1.141

(0.755–1.786), p = 0.623

0.8789

(0.568–1.315), p = 0.616

1.150

(0.640–1.924), p = 0.717

0.842

(0.618–1.140), p = 0.300

0.927

(0.681–1.255), p = 0.680

1.191

(0.874–1.623), p = 0.300

  1. Interleukin 23 (IL23, one SNP), BTNL2 (four SNPs), ras-related protein 23 (rab23, three SNPs), Annexin A11 (ANXA11, two SNPs) and osteosarcoma 9 (OS9) were analyzed. Nominal P-values from an allele-based chi-squared test as well as the odds ratio, including 95% confidence intervals in parentheses, are shown. * p = 0.049 from an allele-based logistic regression. No results remain statistically significant after correction for multiple testing. Analysis for BTNL2 rs28362676 were omitted from the table because unclear genotyping quality. Blod values indicate SNO with a nominal significance of p < 0.1. Italic values indicate SNP with a nominal significance of p < 0.05