Cluster | Population | # DE genes | Up | Down | Control % of cells | COPD % of cells | Fold change | p value (t.test) | p value (Wilcox) |
---|---|---|---|---|---|---|---|---|---|
0 | FABP4 Macrophages | 868 | 620 | 248 | 27.97 ± 10.74 | 5.15 ± 1.57 | 5.43 | 0.02 | 0.057 |
1 | Monocytes | 1499 | 677 | 822 | 23.80 ± 12.90 | 11.24 ± 4.84 | 2.12 | 0.18 | 0.23 |
2 | Cytotoxic T cells | 539 | 165 | 374 | 11.18 ± 6.48 | 21.86 ± 9.80 | − 1.96 | 0.14 | 0.11 |
3 | NK cells | 431 | 233 | 198 | 3.85 ± 2.89 | 22.14 ± 27.41 | − 5.75 | 0.23 | 0.4 |
4 | Endothelial | 242 | 185 | 57 | 9.17 ± 3.90 | 2.37 ± 0.52 | 3.87 | 0.03 | 0.057 |
5 | T cells | 213 | 64 | 149 | 2.11 ± 1.00 | 11.68 ± 9.02 | − 5.54 | 0.08 | 0.23 |
6 | B cells | 153 | 30 | 123 | 0.99 ± 0.59 | 6.80 ± 7.95 | − 6.84 | 0.19 | 0.23 |
7 | Ciliated | 590 | 433 | 157 | 1.84 ± 0.98 | 6.18 ± 4.36 | − 3.35 | 0.10 | 0.23 |
8 | AT2 | 476 | 34 | 442 | 4.12 ± 2.52 | 0.96 ± 0.32 | − 4.28 | 0.09 | 0.057 |
9 | Low quality T cells | 41 | 14 | 27 | 1.75 ± 0.68 | 3.71 ± 2.07 | − 2.12 | 0.13 | 0.11 |
10 | Low quality cells | 596 | 369 | 227 | 2.02 ± 0.95 | 2.83 ± 1.50 | − 1.40 | 0.41 | 0.63 |
11 | Fibroblasts | 96 | 87 | 9 | 3.17 ± 1.62 | 0.27 ± 0.07 | 11.60 | 0.03 | 0.057 |
12 | Club cells | 98 | 70 | 28 | 1.35 ± 0.81 | 2.72 ± 2.16 | − 2.02 | 0.29 | 0.63 |
13 | AT1 | 68 | 59 | 9 | 2.60 ± 1.91 | 0.46 ± 0.36 | 5.71 | 0.12 | 0.11 |
14 | Lymphatic-endothelial | 27 | 20 | 7 | 1.93 ± 1.10 | 0.33 ± 0.29 | 5.85 | 0.06 | 0.23 |
15 | Mast cells | 32 | 25 | 7 | 1.32 ± 0.79 | 0.91 ± 0.24 | 1.44 | 0.44 | 0.63 |
16 | Proliferative macrophages | 111 | 55 | 56 | 0.84 ± 0.35 | 0.39 ± 0.25 | 2.17 | 0.12 | 0.11 |