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Table 2 OTU groups that distinguish the Healthy and the COPD subjects

From: The sputum microbiome is distinct between COPD and health, independent of smoking history

OTU Taxonomy Healthy_mean COPD_mean FDR_P Bonferroni_P
579,608 Firmicutes|Bacilli|Lactobacillales|Streptococcaceae|Streptococcus 658 88 0.001 0·020
787,709 Actinobacteria|Actinobacteria|Actinomycetales|Actinomycetaceae|Actinomyces 363 64 0.001 0·020
1,078,207 Firmicutes|Bacilli|Lactobacillales|Streptococcaceae|Streptococcus 7 184 0.001 0·020
865,469 Proteobacteria|Gammaproteobacteria|Pasteurellales|Pasteurellaceae|Haemophilus 297 2150 0.001 0·020
585,419 Firmicutes|Clostridia|Clostridiales|Veillonellaceae|Veillonella 1611 1214 0.001 0·020
1,083,037 Proteobacteria|Gammaproteobacteria|Pseudomonadales|Moraxellaceae|Moraxella 12 345 0.001 0·020
968,954 Firmicutes|Bacilli|Lactobacillales|Streptococcaceae|Streptococcus 906 2 0.001 0·020
932,696 Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Erwinia 0 782 0.001 0·020
579,924 Proteobacteria|Gammaproteobacteria|Pasteurellales|Pasteurellaceae| 2 210 0.001 0·020
1,083,194 Firmicutes|Bacilli|Lactobacillales|Streptococcaceae|Streptococcus 1290 5 0.001 0·020
1,027,587 Firmicutes|Bacilli|Lactobacillales|Carnobacteriaceae|Granulicatella 57 702 0.001 0·020
1,017,181 Actinobacteria|Actinobacteria|Actinomycetales|Micrococcaceae|Rothia 488 63 0.001 0·020
667,570 Proteobacteria|Gammaproteobacteria|Enterobacteriales|Enterobacteriaceae|Cronobacter 0 702 0.001 0·020
935,742 Bacteroidetes|Bacteroidia|Bacteroidales|Prevotellaceae|Prevotella 298 101 0.001 0·020
342,427 Firmicutes|Clostridia|Clostridiales|Veillonellaceae|Veillonella 44 284 0.001 0·020
  1. Non-parametric t-test was performed on rarefied OTU table at 11,000 reds with OTUs that were observed in minimum 25% of the total number of samples and had a minimum contribution of 1% of the total reads