Table 2 Shows the list of 17 genes with significant differential expression after GSTCD knockdown with an FDR less than 5% from RNA seq analysis. The * denotes those genes with an expression level similar or higher than GSTCD expression
From: Defining a role for lung function associated gene GSTCD in cell homeostasis
Gene | Direction of Effect | SCR vs B log2(fold_change) | SCR vs B q_value | SCR vs C log2(fold_change) | SCR vs C q_value |
|---|---|---|---|---|---|
GSTCD | – | 2.50688 | 0.00625 | 2.60049 | 0.00306 |
AKAP12* | – | 2.06957 | 0.00625 | 1.45912 | 0.00306 |
C12orf49* | – | 1.41126 | 0.00625 | 0.856333 | 0.00306 |
CUX2* | – | 1.30553 | 0.00625 | 0.831766 | 0.00306 |
DESI2* | – | 1.36908 | 0.00625 | 0.69109 | 0.00306 |
UHMK1* | – | 1.10051 | 0.00625 | 1.07772 | 0.00306 |
ST6GALNAC1* | + | 1.05294 | 0.00625 | 1.02191 | 0.00306 |
PPAP2C | + | 1.05893 | 0.00625 | 1.25417 | 0.00306 |
XLOC_020899 | – | 1.54684 | 0.00625 | 1.13877 | 0.01732 |
TGFBR1* | – | 0.86861 | 0.00625 | 0.552792 | 0.04536 |
GPD1L | – | 1.04006 | 0.01063 | 1.23236 | 0.00306 |
FAT2* | + | 0.761438 | 0.01451 | 1.045 | 0.00306 |
LCP1 | – | 1.42681 | 0.01451 | 1.239 | 0.03647 |
TSPAN7 | + | 1.14222 | 0.01451 | 0.915029 | 0.04412 |
ETS1* | – | 0.672957 | 0.03997 | 0.678173 | 0.01232 |
GPR176* | – | 0.864392 | 0.04704 | 0.694795 | 0.02858 |
IL6R* | + | 0.750533 | 0.04874 | 0.825264 | 0.00306 |