Sentinel SNP | CHR | N | Position | P RHR | P COPD | P META | Variant annotation | Genes within clumping region |
---|---|---|---|---|---|---|---|---|
rs3738676 | 1 | 162 | chr1:39552963–40,088,043 | 2.30 × 10− 10 | 1.51 × 10− 3 | 3.07 × 10− 11 | 3′ UTR | BMP8A, KIAA0754, MACF1, PABPC4, PPIEL, SNORA55 |
rs59985166 | 1 | 47 | chr1:10653622–10,753,094 | 2.50 × 10−16 | 2.92 × 10− 3 | 4.08 × 10−18 | Intron | CASZ1, PEX14 |
rs13409705 | 2 | 17 | chr2:28820641–29,115,712 | 2.80 × 10− 10 | 6.57 × 10− 4 | 8.61 × 10− 12 | Intron | PLB1, PPP1CB, SPDYA, TRMT61B |
rs3791979 | 2 | 21 | chr2:218667372–218,704,894 | 2.40 × 10− 9 | 4.15 × 10− 3 | 2.0 × 10− 9 | 3′ UTR | TNS1 |
rs2955083 | 3 | 119 | chr3:127715196–128,067,275 | 6.90 × 10− 4 | 2.0 × 10−8 | 3.56 × 10− 8 | Intron | EEFSEC, RUVBL1, SEC61A1 |
rs9859058 | 3 | 78 | chr3:156353161–156,695,011 | 3.60 × 10−10 | 6.57 × 10−3 | 4.01 × 10− 11 | Intron | LEKR1, LINC00886, PA2G4P4, TIPARP, TIPARP-AS1 |
rs7655625 | 4 | 140 | chr4:145196359–145,974,688 | 2.70 × 10−5 | 3.02 × 10−19 | 1.92 × 10− 19 | Intergenic | ANAPC10, HHIP, HHIP-AS1 |
rs7449334 | 5 | 43 | chr5:90309787–90,418,617 | 1.0 × 10− 10 | 3.59 × 10− 3 | 1.62 × 10−11 | Intron | GPR98 |
rs1158317 | 6 | 5 | chr6:120518685–121,035,654 | 6.50 × 10−11 | 7.45 × 10−3 | 1.19 × 10− 11 | Intergenic | C6orf170* |
rs12173787 | 6 | 144 | chr6:33350201–33,789,899 | 1.20 × 10−15 | 5.4 × 10−3 | 2.79 × 10− 15 | Downstream gene | BAK1, CUTA, GGNBP1, IP6K3, ITPR3, KIFC1, LEMD2, LINC00336, MIR5004, MLN, PHF1, SYNGAP1, UQCC2, ZBTB9 |
rs57942103 | 8 | 11 | chr8:106513461–106,589,409 | 1.90 × 10−10 | 5.06 × 10−3 | 3.10 × 10− 11 | Intron | ZFPM2 |
rs10883944 | 10 | 21 | chr10:105522875–105,667,110 | 7.80 × 10−9 | 2.11 × 10−4 | 2.33 × 10−10 | Intron | OBFC1, SH3PXD2A |
rs4746139 | 10 | 92 | chr10:75404300–75,692,923 | 4.50 × 10−10 | 9.94 × 10−3 | 1.60 × 10− 10 | Synonymous | AGAP5, BMS1P4, C10orf55, CAMK2G, CHCHD1, FUT11, GLUD1P3, NDST2, PLAU, SEC24C, SYNPO2L, ZSWIM8, ZSWIM8-AS1 |
rs2512519 | 11 | 68 | chr11:77924870–78,286,462 | 2.10 × 10− 10 | 2.32 × 10−3 | 4.39 × 10−12 | Intron | GAB2, NARS2, USP35 |
rs8756 | 12 | 12 | chr12:66306441–66,389,968 | 2.20 × 10−11 | 3.22 × 10−3 | 2.57 × 10− 12 | 3′ UTR | HMGA2 |
rs56386186 | 14 | 77 | chr14:102418380–102,784,274 | 1.70 × 10−10 | 2.79 × 10−3 | 1.22 × 10−11 | Intron | DYNC1H1, HSP90AA1, MOK, WDR20, ZNF839 |
rs7143026 | 14 | 17 | chr14:65825854–66,272,664 | 1.90 × 10−6 | 1.22 × 10−4 | 2.54 × 10−8 | Intergenic | FUT8, FUT8-AS1 |
rs754388 | 14 | 34 | chr14:93068516–93,118,229 | 3.0 × 10−4 | 7.07 × 10−12 | 1.03 × 10−11 | Intron | RIN3 |
rs17186681 | 15 | 138 | chr15:63800237–64,148,582 | 2.50 × 10−11 | 6.57 × 10−3 | 1.50 × 10−12 | Intron | FBXL22, HERC1, USP3, USP3-AS1 |
rs17431820 | 16 | 10 | chr16:64939145–65,128,819 | 5.30 × 10−12 | 9.78 × 10−3 | 2.38 × 10− 12 | Intron | CDH11 |
rs12709669 | 18 | 14 | chr18:19780858–19,826,742 | 4.10 × 10−9 | 4.80 × 10−3 | 8.11 × 10−10 | Intron | GATA6 |