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Table 2 Sequence characteristics of samples from the control, biomass fuel, and motor vehicle exhaust groups

From: Exposure to ambient particulate matter alters the microbial composition and induces immune changes in rat lung

Sample

Raw reads

Clean reads

Clean rate (%)

OTUs

C1

48,881

47,021

95.4

1482

C2

42,486

40,658

94.9

968

C3

51,592

48,734

93.6

1363

C4

61,056

58,690

95.2

1115

C5

84,335

64,554

67.2

1114

C6

64,101

61,549

95.3

1325

B1

99,701

73,766

71.7

2277

B2

96,756

73,463

70.1

1926

B3

106,549

82,315

68.7

1481

B4

101,385

78,044

68.0

1560

B5

103,303

76,117

65.0

1544

B6

82,009

65,377

72.8

1123

M1

83,505

69,310

77.3

1933

M2

69,562

59,557

83.1

3254

M3

110,918

92,134

77.8

2855

M4

67,860

57,459

76.2

1870

M5

102,845

76,430

67.4

2266

M6

108,019

80,705

66.8

2245

  1. C1–C6, control group; B1–B6, biomass fuel exposure group; M1–M6, motor vehicle exhaust exposure group; n = 6 experiments. OUT, operational taxonomic unit