Skip to main content

Table 2 Spectral counting and protein ratios for differentially expressed proteins

From: Differentially expressed and activated proteins associated with non small cell lung cancer tissues

Protein

Gene

NSAFa

NSAFa

Rsc b

NSCLC

Control

carbonic anhydrase 2

CA2

0

0,00693

3,10

MHC class I antigen

HLA-DQB

0

0,0131

2,43

alcohol dehydrogenase beta subunit

ADH1B

0

0,00356

2,43

carbonic anhydrase 1

CA1

0,00559

0,0180

2,10

profilin-1

PFN1

0

0,00513

1,94

MHC class II antigen

HLA-DRB1

0

0,00931

1,94

rho GDP-dissociation inhibitor

ARHGDIB

0

0,00393

1,94

aldolase A

ALDOA

0,00591

0,000974

-1,61

ribosomal protein L7

RPL7

0,00869

0,00143

-1,61

enoyl-CoA hydratase

EHHADH

0,00250

0

-1,97

lactoferrin precursor

LTF

0,0124

0,00154

-2,25

proteasome subunit alpha type-6

PSMA6

0,0174

0,00144

-2,52

Aldo-keto reductase family 1 member C4

AKR1C4

0,00579

0

-2,71

stomatin

STOM

0,00604

0

-2,71

60S acidic ribosomal protein P0

RPLP0

0,00807

0

-3,20

phosphoglycerate mutase 1

PGAM1

0,0107

0

-3,20

endoplasmic reticulum protein 29, isoform CRA_b

ERP29

0,00894

0

-3,20

myeloperoxidase, isoform CRA_d

MPO

0,0184

0,00076

-3,48

L-lactate dehydrogenase A isoform 1

LDHA

0,00859

0

-3,57

azurocidin

AZU1

0,0161

0

-3,86

  1. aNormalized Spectral Abundance Factor
  2. bRsc is calculated according to semi-quantitative parameter proposed by Old [42] and represents the log2 ratio between the protein expression level of control vs the protein expression level of NSCLC tissues. Proteins with Rsc ≥ 1,50 or ≤ -1,50 were considered differentially expressed