Skip to main content

Table 7 qPCR Validation of microarray experiment

From: Genome-wide mRNA expression profiling in vastus lateralis of COPD patients with low and normal fat free mass index and healthy controls

Gene symbol

Microarray selection criteria

qPCR result

CDKN1A

PFP <0.005, FC 2.19 COPDL vs C

p < 0.005

CEBPA

PFP <0.005, FC 2.08 COPDL vs C

p < 0.005

CYR61

PFP <0.005, FC 2.6 COPDL vs C

p < 0.005

EFCAB7

PFP <0.005, FC 2.63 COPDL vs C

p < 0.005

EGR1

PFP <0.005, FC −2.11 COPDN vs C

p < 0.05

HMOX1

PFP <0.005, FC −2.31 COPDL vs C

p = 0.06

PFP <0.005, FC −2.26 COPDN vs C

p < 0.05

PDE11

PFP <0.005, FC −2.28 COPDL vs C

p < 0.05

SAA1

PFP <0.005, FC 3.8 COPDL vs C

p < 0.005

PFP <0.005, FC 10.1 COPDN vs C

ns

SLC22A3

PFP <0.005, FC 2.46 COPDL vs COPDN

ns

PFP <0.005, FC 4.62 COPDL vs C

p < 0.05

SLC38A1

PFP <0.005, FC 3.02 COPDL vs C

p < 0.005

SLC43A2

PFP <0.005, FC −2.1 COPDL vs C

p < 0.005

  1. Comparative results of eleven selected genes for validation between microarrays and qPCR.