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Table 7 qPCR Validation of microarray experiment

From: Genome-wide mRNA expression profiling in vastus lateralis of COPD patients with low and normal fat free mass index and healthy controls

Gene symbol Microarray selection criteria qPCR result
CDKN1A PFP <0.005, FC 2.19 COPDL vs C p < 0.005
CEBPA PFP <0.005, FC 2.08 COPDL vs C p < 0.005
CYR61 PFP <0.005, FC 2.6 COPDL vs C p < 0.005
EFCAB7 PFP <0.005, FC 2.63 COPDL vs C p < 0.005
EGR1 PFP <0.005, FC −2.11 COPDN vs C p < 0.05
HMOX1 PFP <0.005, FC −2.31 COPDL vs C p = 0.06
PFP <0.005, FC −2.26 COPDN vs C p < 0.05
PDE11 PFP <0.005, FC −2.28 COPDL vs C p < 0.05
SAA1 PFP <0.005, FC 3.8 COPDL vs C p < 0.005
PFP <0.005, FC 10.1 COPDN vs C ns
SLC22A3 PFP <0.005, FC 2.46 COPDL vs COPDN ns
PFP <0.005, FC 4.62 COPDL vs C p < 0.05
SLC38A1 PFP <0.005, FC 3.02 COPDL vs C p < 0.005
SLC43A2 PFP <0.005, FC −2.1 COPDL vs C p < 0.005
  1. Comparative results of eleven selected genes for validation between microarrays and qPCR.