Name | Â | Primer sequence | Amplicon length (bp) | Nucleotide (ORF)/amino acid position |
---|---|---|---|---|
Region 1 | Fb | 5' CCGTGGCCGAATACACCTT 3' | 127 | -167 |
 | R | 5' CATTGGCGCCCTTTACGTA 3' |  |  |
Region 2 | F | 5' GAGCTTCACCACAGCAAGCA 3' | 127 | 76–202/26–67 |
 | R | 5' AAGCTAGATTCTTTTCGTTCAGCAA 3' |  |  |
Region 3 | F | 5' CGTCGCCAAACTCGAAGAG 3' | 151 | 129–279/44–93 |
 | R | 5' GCCGGTGGGCTTGTCA 3' |  |  |
Region 4 | F | 5' GCCACGTCAATCACACCATCT 3' | 232 | 215–446/73–149 |
 | R | 5' AAGTTCGTCTGGTGGTCGTAAAC 3' |  |  |
Region 5 | F | 5' GGGACACACTCGGCAACAA 3' | 158 | 389–546/131–182 |
 | R | 5' CAAAACGCCTTGGCAAAGTC 3' |  |  |
Region 6 | F | 5' TTTACGACCACCAGACGAACTTC 3' | 161 | 425–585/150–195 |
 | R | 5' CGCATACCGTGACTGCACAT 3' |  |  |