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Table 2 10-SNP haplotype frequencies in the Hutterites. Haplotypes were constructed manually (see Methods). Only individuals with complete haplotype information for both chromosomes are included (N = 1168 chromosomes). SNPs in the IL13 gene that are associated with IgE and +SPT in the Hutterites are in bold font.

From: Variation in conserved non-coding sequences on chromosome 5q and susceptibility to asthma and atopy

  

IL13

IL4

Intergenic Region

Haplotype

Frequency

-1112C/T

+1923C/T

Arg130Gln (G→ A)

-589C/T

SNP2C/T

SNP4G/A

+3017G/T

+8374A/G

SNP7A/G

SNP8C/G

1

0.660

C

C

G

C

C

G

G

A

A

G

2

0.070

T

C

G

C

C

G

G

A

A

G

3

0.008

C

T

A

C

C

G

G

A

A

G

4

0.021

T

T

A

C

C

G

G

A

A

G

5

0.021

C

C

G

C

C

G

T

A

G

C

6

0.034

T

T

A

C

C

G

T

A

G

C

7

0.019

C

T

A

C

C

G

T

A

G

C

8

0.068

C

C

G

T

T

A

T

G

G

C

9

0.098

T

T

A

T

T

A

T

G

G

C