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Table 3 List of genes with lung-restricted expression found by tissue correlation analysis with Sftpc.

From: Genome-wide analysis of the mouse lung transcriptome reveals novel molecular gene interaction networks and cell-specific expression signatures

Probe set Symbol Description Location (Chr, Mb) Mean Expr BioGPS expression
1418639_at Sftpc surfactant associated protein C Chr14: 70.920826 14,92 high in lung, low in nucleus accumbens
1437028_at Sftpb surfactant associated protein B (nonciliated bronchiolar and alveolar type 2 cell signature) Chr6: 72.260763 13,68 high in lung only
1422334_a_at Sftpa1 surfactant associated protein A1 Chr14: 41.946994 14,24 high in lung only
1422346_at Nkx2-1 (Titf1) thyroid transcription factor 1 Chr12: 57.634187 8,07 lung only
1417057_a_at Lamp3 lysosomal-associated membrane protein 3 Chr16: 19.653875 12,09 high in lung, low in ES cells and some cell lines
1421404_at Cxcl15 chemokine (C-X-C motif) ligand 15 Chr5: 91.230349 13,87 high in lung only
1441958_s_at Ager advanced glycosylation end product-specific receptor Chr17: 34.737745 14,69 high in lung only
1436787_x_at Sec14l3 SEC14-like protein 3 Chr11: 3.978573 13,21 only data for human available - not lung specific
1425218_a_at Scgb3a2 secretoglobin, family 3A, member 2 Chr18: 43.924081 14,17 high in lung only
1449428_at Cldn18 claudin 18 Chr9: 99.591247 12,70 highest in lung, lower in stomach
1449525_at Fmo3 flavin containing monooxygenase 3 Chr1: 164.884088 10,90 high in lung, maybe weak in some other tissues
1425814_a_at Calcrl calcitonin receptor-like Chr2: 84.170818 12,91 high in lung, weak in macrophages
1421373_at Cox4i2 cytochrome c oxidase subunit IV isoform 2 Chr2: 152.582819 9,24 not specific for lung
1419699_at Scgb3a1 secretoglobin, family 3A, member 1 Chr11: 49.477871 13,68 high in lung only
1451604_a_at Acvrl1 activin A receptor, type II-like 1 Chr15: 100.968668 11,86 high in lung only
1420347_at Plunc palate, lung, and nasal epithelium carcinoma associated Chr2: 153.973359 13,42 high in lung, low in heart
  1. Mean Expr: mean expression in lung for BXD strains. BioGPS: evaluation of expression pattern as described in BioGPS.