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Table 1 Autophagy PCR array

From: Endothelial-like cells in chronic thromboembolic pulmonary hypertension: crosstalk with myofibroblast-like cells

Biological process description

Gene name

Gene symbol

Public ID

P-value

Autophagy Machinary Components: Genes Involved in Autophagic Vacuole Formation

Autophagy/beclin-1 regulator 1

AMBRA1

NM_017749

0.00308

Autophagy Machinary Components: Genes Involved in Autophagic Vacuole Formation

Genes Responsible for Protein Targeting to Membrane/Vacuole

Genes Responsible for Protein Transport

Genes with Protease Activity

ATG4 autophagy related 4 homolog D (S. cerevisiae)

ATG4D

NM_032885

NM_017749

0.01167

Regulation of Autophagy:

Co-Regulators of Autophagy and Apoptosis

B-cell CLL/lymphoma 2

BCL2

NM_000633

0.000727

Regulation of Autophagy:

Co-Regulators of Autophagy and Apoptosis

BH3 interacting domain death agonist

BID

NM_001196

0.047933

Regulation of Autophagy:

Co-Regulators of Autophagy and Apoptosis

Cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)

CDKN2A

NM_000077

0.044888

Regulation of Autophagy:

Co-Regulators of Autophagy and Apoptosis

Cathepsin B

CTSB

NM_001908

0.010802

Regulation of Autophagy:

Chaperone-Mediated Autophagy

Heat shock protein 90 kDa alpha (cytosolic), class A member 1

HSP90AA1

NM_001017963

0.037151

Regulation of Autophagy:

Co-Regulators of Autophagy and Apoptosis

Huntingtin

HTT

NM_002111

0.033212

Regulation of Autophagy:

Co-Regulators of Autophagy and Apoptosis

Co-Regulators of Autophagy and the Cell Cycle

Interferon, gamma

IFNG

NM_000619

0.017749

Regulation of Autophagy:

Co-Regulators of Autophagy and Apoptosis

Insulin-like growth factor 1 (somatomedin C)

IGF1

NM_000618

0.017282

Regulation of Autophagy:

Co-Regulators of Autophagy and Apoptosis

Insulin

INS

NM_000207

0.045037

Autophagy Machinary Components: Genes Involved in Autophagic Vacuole Formation

Microtubule-associated protein 1 light chain 3 beta

MAP1LC3B

NM_022818

0.011251

Regulation of Autophagy:

Co-Regulators of Autophagy and Apoptosis

Autophagy in Response to Other Intracellular Signals

Protein kinase, AMP-activated, alpha 1 catalytic subunit

PRKAA1

NM_006251

0.005633

Autophagy Machinary Components: Genes Involved in Autophagic Vacuole Formation

Regulator of G-protein signaling 19

RGS19

NM_005873

0.021592

Regulation of Autophagy:

Autophagy in Response to Other Intracellular Signals

Ribosomal protein S6 kinase, 70 kDa, polypeptide 1

RPS6KB1

NM_003161

0.024072

Regulation of Autophagy:

Autophagy in Response to Other Intracellular Signals

Transmembrane protein 77

TMEM77

NM_178454

0.019285

Regulation of Autophagy:

Autophagy in Response to Other Intracellular Signals

UV radiation resistance associated gene

UVRAG

NM_003369

0.016479

  1. Functional classification of low expressed genes in co-cultured HPMVECs with MFLCs in comparison to PAFLCs