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Table 3 Polymorphisms associated with the RNASE3 gene

From: Analysing the eosinophil cationic protein - a clue to the function of the eosinophil granulocyte

Polymorphism

alleles

Alternative names

location, effect

rs2284954

A/G

-550A > G

promoter

rs11575981

C/T

-393T > C

promoter, disrupt C/EBP binding site, correlate with s-ECP [142]

rs2233858

C/T

 

intron

rs2233859/rs17792481

A/C

-38C > A

intron (in a GATA-1 site) a

rs2073342

C/G

371G > C, 434G > C

protein coding, Y > G is associated with allergic asthma [40]a, poor outcome in oral squamous cell carcinoma tumours [146], C over represented in helminth infected Ugandans [148]

rs12147890

A/G

 

protein coding

rs2233860

G/C

 

3' UTR,G is correlated to higher intracellular ECP [143], G is associated with allergic rhinitis [145], a

rs8019343

A/T

499G > C, 562G > C

3' UTR T is only present in one patient with helminth infection [147]

  1. Polymorphisms found in the ECP gene and surrounding chromosomal sequence. Listed are Polymorphism i.d.'s, altered bases, alternative names, and types of associations
  2. a) C-G-G haplotype associated with allergic rhinitis [144]